Protein–RNA interactions for Protein: Q4VA36

Ccdc84, Coiled-coil domain-containing protein 84, mousemouse

Known RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84Q4VA36 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc84Q4VA36 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Mir770-201ENSMUST00000103252 94 ntBASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc84Q4VA36 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Gm37722-201ENSMUST00000193757 208 ntBASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc84Q4VA36 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc84Q4VA36 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc84Q4VA36 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Gm6623-201ENSMUST00000173570 544 ntBASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Mir3081-201ENSMUST00000175305 84 ntBASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc84Q4VA36 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Olfr129-201ENSMUST00000122318 993 ntBASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc84Q4VA36 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms