Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Mir1668-201ENSMUST00000184114 107 ntBASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf223Q3UV31 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Gm21559-201ENSMUST00000220638 855 ntBASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Gm8587-201ENSMUST00000076538 843 ntBASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf223Q3UV31 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Gm10566-201ENSMUST00000086739 996 ntBASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf223Q3UV31 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf223Q3UV31 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf223Q3UV31 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf223Q3UV31 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms