Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Gm17661-201ENSMUST00000170317 270 ntBASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Naf1Q3UMQ8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Naf1Q3UMQ8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Naf1Q3UMQ8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Naf1Q3UMQ8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Naf1Q3UMQ8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Naf1Q3UMQ8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Naf1Q3UMQ8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Naf1Q3UMQ8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Naf1Q3UMQ8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Naf1Q3UMQ8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Gm22697-201ENSMUST00000175194 63 ntBASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms