Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl4Q3TZA2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdkl4Q3TZA2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdkl4Q3TZA2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl4Q3TZA2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Gm7977-201ENSMUST00000193787 748 ntBASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl4Q3TZA2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Gm11539-201ENSMUST00000119837 557 ntBASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Gm13436-201ENSMUST00000120418 567 ntBASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdkl4Q3TZA2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl4Q3TZA2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl4Q3TZA2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl4Q3TZA2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl4Q3TZA2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms