Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna5Q2MKA5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna5Q2MKA5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Gm27000-201ENSMUST00000182943 842 ntBASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chrna5Q2MKA5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna5Q2MKA5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Gm27525-201ENSMUST00000184465 107 ntBASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.5■□□□□ 0.87
Chrna5Q2MKA5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna5Q2MKA5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms