Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm7638-201ENSMUST00000121348 967 ntBASIC17.45■□□□□ 0.38
Ebf1Q07802 Gm7284-201ENSMUST00000131667 944 ntBASIC17.45■□□□□ 0.38
Ebf1Q07802 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf1Q07802 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.44■□□□□ 0.38
Ebf1Q07802 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.44■□□□□ 0.38
Ebf1Q07802 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf1Q07802 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf1Q07802 Gm10418-201ENSMUST00000100943 576 ntBASIC17.44■□□□□ 0.38
Ebf1Q07802 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.44■□□□□ 0.38
Ebf1Q07802 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.44■□□□□ 0.38
Ebf1Q07802 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Ebf1Q07802 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ebf1Q07802 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf1Q07802 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf1Q07802 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.44■□□□□ 0.38
Ebf1Q07802 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf1Q07802 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf1Q07802 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Ebf1Q07802 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.43■□□□□ 0.38
Ebf1Q07802 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Gm5587-201ENSMUST00000206270 674 ntBASIC17.43■□□□□ 0.38
Ebf1Q07802 Gm21559-201ENSMUST00000220638 855 ntBASIC17.43■□□□□ 0.38
Ebf1Q07802 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Gm8587-201ENSMUST00000076538 843 ntBASIC17.43■□□□□ 0.38
Ebf1Q07802 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ebf1Q07802 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf1Q07802 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.42■□□□□ 0.38
Ebf1Q07802 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ebf1Q07802 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Gm24841-201ENSMUST00000158676 357 ntBASIC17.42■□□□□ 0.38
Ebf1Q07802 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.42■□□□□ 0.38
Ebf1Q07802 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Gm27389-201ENSMUST00000183622 195 ntBASIC17.42■□□□□ 0.38
Ebf1Q07802 Gm7791-201ENSMUST00000219066 539 ntBASIC17.42■□□□□ 0.38
Ebf1Q07802 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ebf1Q07802 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.42■□□□□ 0.38
Ebf1Q07802 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ebf1Q07802 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.42■□□□□ 0.38
Ebf1Q07802 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf1Q07802 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Ebf1Q07802 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.41■□□□□ 0.38
Ebf1Q07802 Gm13401-201ENSMUST00000117074 291 ntBASIC17.41■□□□□ 0.38
Ebf1Q07802 Gm9013-201ENSMUST00000132939 882 ntBASIC17.41■□□□□ 0.38
Ebf1Q07802 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.41■□□□□ 0.38
Ebf1Q07802 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Ebf1Q07802 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.41■□□□□ 0.38
Ebf1Q07802 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ebf1Q07802 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf1Q07802 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms