Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sox4Q06831 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.96■□□□□ 0.31
Sox4Q06831 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Sox4Q06831 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sox4Q06831 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Sox4Q06831 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.96■□□□□ 0.3
Sox4Q06831 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Sox4Q06831 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox4Q06831 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Sox4Q06831 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.95■□□□□ 0.3
Sox4Q06831 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.95■□□□□ 0.3
Sox4Q06831 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.95■□□□□ 0.3
Sox4Q06831 Gm9731-201ENSMUST00000209480 747 ntBASIC16.95■□□□□ 0.3
Sox4Q06831 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sox4Q06831 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox4Q06831 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sox4Q06831 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.94■□□□□ 0.3
Sox4Q06831 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox4Q06831 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sox4Q06831 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox4Q06831 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Sox4Q06831 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.93■□□□□ 0.3
Sox4Q06831 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Gm17661-201ENSMUST00000170317 270 ntBASIC16.93■□□□□ 0.3
Sox4Q06831 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sox4Q06831 Gm7889-201ENSMUST00000185591 958 ntBASIC16.93■□□□□ 0.3
Sox4Q06831 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Gm9987-201ENSMUST00000069768 567 ntBASIC16.93■□□□□ 0.3
Sox4Q06831 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sox4Q06831 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sox4Q06831 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.93■□□□□ 0.3
Sox4Q06831 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sox4Q06831 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox4Q06831 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox4Q06831 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox4Q06831 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox4Q06831 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox4Q06831 Gm6433-201ENSMUST00000118634 875 ntBASIC16.92■□□□□ 0.3
Sox4Q06831 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.92■□□□□ 0.3
Sox4Q06831 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Sox4Q06831 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox4Q06831 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.92■□□□□ 0.3
Sox4Q06831 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox4Q06831 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox4Q06831 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.92■□□□□ 0.3
Sox4Q06831 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox4Q06831 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox4Q06831 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms