Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.64■□□□□ 0.74
GabpaQ00422 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GabpaQ00422 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
GabpaQ00422 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.64■□□□□ 0.73
GabpaQ00422 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
GabpaQ00422 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
GabpaQ00422 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.63■□□□□ 0.73
GabpaQ00422 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GabpaQ00422 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GabpaQ00422 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GabpaQ00422 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.63■□□□□ 0.73
GabpaQ00422 Ank2-226ENSMUST00000189368 339 ntBASIC19.63■□□□□ 0.73
GabpaQ00422 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GabpaQ00422 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.63■□□□□ 0.73
GabpaQ00422 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GabpaQ00422 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GabpaQ00422 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GabpaQ00422 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GabpaQ00422 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GabpaQ00422 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.62■□□□□ 0.73
GabpaQ00422 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Gm26039-201ENSMUST00000158152 144 ntBASIC19.62■□□□□ 0.73
GabpaQ00422 Gm29518-201ENSMUST00000190858 372 ntBASIC19.62■□□□□ 0.73
GabpaQ00422 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.62■□□□□ 0.73
GabpaQ00422 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
GabpaQ00422 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
GabpaQ00422 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GabpaQ00422 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.61■□□□□ 0.73
GabpaQ00422 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
GabpaQ00422 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.61■□□□□ 0.73
GabpaQ00422 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GabpaQ00422 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GabpaQ00422 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
GabpaQ00422 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GabpaQ00422 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Gm11355-201ENSMUST00000121120 306 ntBASIC19.6■□□□□ 0.73
GabpaQ00422 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.6■□□□□ 0.73
GabpaQ00422 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.6■□□□□ 0.73
GabpaQ00422 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
GabpaQ00422 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GabpaQ00422 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Gm7284-201ENSMUST00000131667 944 ntBASIC19.59■□□□□ 0.73
GabpaQ00422 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GabpaQ00422 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.59■□□□□ 0.73
GabpaQ00422 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GabpaQ00422 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GabpaQ00422 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GabpaQ00422 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
GabpaQ00422 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.58■□□□□ 0.73
GabpaQ00422 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
GabpaQ00422 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GabpaQ00422 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GabpaQ00422 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
GabpaQ00422 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GabpaQ00422 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms