Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
IhhP97812 Gm16061-201ENSMUST00000122167 857 ntBASIC17.93■□□□□ 0.46
IhhP97812 Gm27000-201ENSMUST00000182943 842 ntBASIC17.93■□□□□ 0.46
IhhP97812 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
IhhP97812 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
IhhP97812 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.93■□□□□ 0.46
IhhP97812 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IhhP97812 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
IhhP97812 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.92■□□□□ 0.46
IhhP97812 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
IhhP97812 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IhhP97812 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IhhP97812 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.91■□□□□ 0.46
IhhP97812 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.91■□□□□ 0.46
IhhP97812 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
IhhP97812 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IhhP97812 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.91■□□□□ 0.46
IhhP97812 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.91■□□□□ 0.46
IhhP97812 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.91■□□□□ 0.46
IhhP97812 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.9■□□□□ 0.46
IhhP97812 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.9■□□□□ 0.46
IhhP97812 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IhhP97812 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
IhhP97812 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
IhhP97812 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
IhhP97812 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
IhhP97812 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
IhhP97812 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
IhhP97812 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
IhhP97812 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
IhhP97812 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.89■□□□□ 0.45
IhhP97812 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IhhP97812 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.88■□□□□ 0.45
IhhP97812 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
IhhP97812 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
IhhP97812 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.88■□□□□ 0.45
IhhP97812 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.88■□□□□ 0.45
IhhP97812 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
IhhP97812 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.87■□□□□ 0.45
IhhP97812 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IhhP97812 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IhhP97812 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.87■□□□□ 0.45
IhhP97812 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IhhP97812 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IhhP97812 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms