Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43cP86449 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43cP86449 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Trim43cP86449 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim43cP86449 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43cP86449 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43cP86449 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43cP86449 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim43cP86449 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43cP86449 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43cP86449 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim43cP86449 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim43cP86449 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.76■□□□□ 0.59
Trim43cP86449 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim43cP86449 Timm23-208ENSMUST00000226683 750 ntBASIC18.76■□□□□ 0.59
Trim43cP86449 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim43cP86449 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim43cP86449 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim43cP86449 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim43cP86449 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43cP86449 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim43cP86449 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trim43cP86449 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim43cP86449 Gm7638-201ENSMUST00000121348 967 ntBASIC18.75■□□□□ 0.59
Trim43cP86449 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim43cP86449 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.75■□□□□ 0.59
Trim43cP86449 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim43cP86449 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43cP86449 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim43cP86449 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.74■□□□□ 0.59
Trim43cP86449 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43cP86449 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim43cP86449 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim43cP86449 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Trim43cP86449 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Trim43cP86449 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim43cP86449 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim43cP86449 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trim43cP86449 Gm37025-201ENSMUST00000195159 829 ntBASIC18.73■□□□□ 0.59
Trim43cP86449 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.73■□□□□ 0.59
Trim43cP86449 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43cP86449 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim43cP86449 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trim43cP86449 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim43cP86449 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms