Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.17■□□□□ 0.02
Hist1h3bP84228 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.17■□□□□ 0.02
Hist1h3bP84228 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3bP84228 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3bP84228 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Gm10653-202ENSMUST00000139570 835 ntBASIC15.15■□□□□ 0.02
Hist1h3bP84228 Gm43183-201ENSMUST00000200632 547 ntBASIC15.15■□□□□ 0.02
Hist1h3bP84228 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.15■□□□□ 0.02
Hist1h3bP84228 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.15■□□□□ 0.02
Hist1h3bP84228 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hist1h3bP84228 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gm15378-201ENSMUST00000121894 207 ntBASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gm12382-201ENSMUST00000122005 922 ntBASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gm20760-201ENSMUST00000179197 648 ntBASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gm10698-201ENSMUST00000182663 604 ntBASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gm4974-201ENSMUST00000209974 875 ntBASIC15.14■□□□□ 0.01
Hist1h3bP84228 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h3bP84228 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h3bP84228 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hist1h3bP84228 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms