Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CiitaP79621 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CiitaP79621 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CiitaP79621 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.71■□□□□ 0.59
CiitaP79621 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CiitaP79621 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.71■□□□□ 0.59
CiitaP79621 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.7■□□□□ 0.58
CiitaP79621 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CiitaP79621 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CiitaP79621 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
CiitaP79621 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CiitaP79621 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.7■□□□□ 0.58
CiitaP79621 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CiitaP79621 Gm18101-201ENSMUST00000215769 548 ntBASIC18.7■□□□□ 0.58
CiitaP79621 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CiitaP79621 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.7■□□□□ 0.58
CiitaP79621 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.7■□□□□ 0.58
CiitaP79621 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CiitaP79621 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CiitaP79621 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CiitaP79621 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CiitaP79621 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CiitaP79621 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CiitaP79621 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.69■□□□□ 0.58
CiitaP79621 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CiitaP79621 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.69■□□□□ 0.58
CiitaP79621 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CiitaP79621 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CiitaP79621 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.69■□□□□ 0.58
CiitaP79621 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CiitaP79621 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CiitaP79621 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CiitaP79621 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CiitaP79621 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CiitaP79621 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.68■□□□□ 0.58
CiitaP79621 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.68■□□□□ 0.58
CiitaP79621 Gm23634-201ENSMUST00000175071 91 ntBASIC18.68■□□□□ 0.58
CiitaP79621 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CiitaP79621 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CiitaP79621 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CiitaP79621 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CiitaP79621 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CiitaP79621 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CiitaP79621 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.67■□□□□ 0.58
CiitaP79621 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.67■□□□□ 0.58
CiitaP79621 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CiitaP79621 Gm7213-201ENSMUST00000215977 950 ntBASIC18.67■□□□□ 0.58
CiitaP79621 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.67■□□□□ 0.58
CiitaP79621 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CiitaP79621 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.67■□□□□ 0.58
CiitaP79621 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CiitaP79621 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CiitaP79621 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CiitaP79621 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.66■□□□□ 0.58
CiitaP79621 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms