Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Frat1P70339 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Frat1P70339 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Frat1P70339 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.81■□□□□ 0.6
Frat1P70339 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.81■□□□□ 0.6
Frat1P70339 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.81■□□□□ 0.6
Frat1P70339 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Frat1P70339 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Frat1P70339 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.8■□□□□ 0.6
Frat1P70339 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Frat1P70339 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.8■□□□□ 0.6
Frat1P70339 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.8■□□□□ 0.6
Frat1P70339 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Frat1P70339 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Frat1P70339 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Frat1P70339 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Frat1P70339 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Frat1P70339 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Frat1P70339 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Frat1P70339 Gm26833-201ENSMUST00000180899 440 ntBASIC18.79■□□□□ 0.6
Frat1P70339 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Frat1P70339 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.79■□□□□ 0.6
Frat1P70339 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Frat1P70339 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Frat1P70339 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.78■□□□□ 0.6
Frat1P70339 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Frat1P70339 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Frat1P70339 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Frat1P70339 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Frat1P70339 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Frat1P70339 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Frat1P70339 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Frat1P70339 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Frat1P70339 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Frat1P70339 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Frat1P70339 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Frat1P70339 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Frat1P70339 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Frat1P70339 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.77■□□□□ 0.6
Frat1P70339 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Frat1P70339 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Frat1P70339 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Frat1P70339 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Frat1P70339 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Frat1P70339 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Frat1P70339 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Frat1P70339 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.76■□□□□ 0.59
Frat1P70339 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.76■□□□□ 0.59
Frat1P70339 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Frat1P70339 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.76■□□□□ 0.59
Frat1P70339 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Frat1P70339 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Frat1P70339 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Frat1P70339 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Frat1P70339 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms