Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Mir1199-201ENSMUST00000117015 119 ntBASIC14.35□□□□□ -0.11
Pdlim4P70271 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim4P70271 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim4P70271 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim4P70271 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim4P70271 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim4P70271 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim4P70271 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Gm13401-201ENSMUST00000117074 291 ntBASIC14.34□□□□□ -0.11
Pdlim4P70271 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim4P70271 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim4P70271 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.33□□□□□ -0.11
Pdlim4P70271 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim4P70271 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Pdlim4P70271 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim4P70271 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.33□□□□□ -0.12
Pdlim4P70271 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.33□□□□□ -0.12
Pdlim4P70271 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim4P70271 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim4P70271 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.33□□□□□ -0.12
Pdlim4P70271 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim4P70271 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdlim4P70271 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.32□□□□□ -0.12
Pdlim4P70271 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdlim4P70271 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pdlim4P70271 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdlim4P70271 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pdlim4P70271 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pdlim4P70271 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim4P70271 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim4P70271 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.31□□□□□ -0.12
Pdlim4P70271 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pdlim4P70271 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdlim4P70271 Gm10517-202ENSMUST00000192970 758 ntBASIC14.31□□□□□ -0.12
Pdlim4P70271 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pdlim4P70271 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.31□□□□□ -0.12
Pdlim4P70271 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Pdlim4P70271 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim4P70271 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms