Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Lhx1P63006 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Lhx1P63006 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.98■□□□□ 0.31
Lhx1P63006 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.98■□□□□ 0.31
Lhx1P63006 Gm7977-201ENSMUST00000193787 748 ntBASIC16.98■□□□□ 0.31
Lhx1P63006 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
Lhx1P63006 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lhx1P63006 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lhx1P63006 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lhx1P63006 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lhx1P63006 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lhx1P63006 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.97■□□□□ 0.31
Lhx1P63006 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lhx1P63006 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lhx1P63006 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lhx1P63006 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.96■□□□□ 0.31
Lhx1P63006 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Lhx1P63006 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lhx1P63006 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Lhx1P63006 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Lhx1P63006 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lhx1P63006 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lhx1P63006 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lhx1P63006 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lhx1P63006 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.96■□□□□ 0.3
Lhx1P63006 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lhx1P63006 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Lhx1P63006 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.95■□□□□ 0.3
Lhx1P63006 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Lhx1P63006 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.95■□□□□ 0.3
Lhx1P63006 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Lhx1P63006 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.95■□□□□ 0.3
Lhx1P63006 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.95■□□□□ 0.3
Lhx1P63006 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Lhx1P63006 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Lhx1P63006 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lhx1P63006 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Lhx1P63006 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.94■□□□□ 0.3
Lhx1P63006 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Lhx1P63006 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx1P63006 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lhx1P63006 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lhx1P63006 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx1P63006 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 238.9 ms