Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Rpl39P62892 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.36□□□□□ -0.43
Rpl39P62892 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rpl39P62892 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpl39P62892 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rpl39P62892 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.36□□□□□ -0.43
Rpl39P62892 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpl39P62892 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl39P62892 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.35□□□□□ -0.43
Rpl39P62892 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.35□□□□□ -0.43
Rpl39P62892 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl39P62892 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.35□□□□□ -0.43
Rpl39P62892 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpl39P62892 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpl39P62892 Gm45417-201ENSMUST00000209533 758 ntBASIC12.35□□□□□ -0.43
Rpl39P62892 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl39P62892 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpl39P62892 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl39P62892 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpl39P62892 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl39P62892 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Rpl39P62892 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpl39P62892 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpl39P62892 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rpl39P62892 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.33□□□□□ -0.44
Rpl39P62892 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rpl39P62892 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.33□□□□□ -0.44
Rpl39P62892 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rpl39P62892 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rpl39P62892 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl39P62892 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms