Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nup43P59235 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nup43P59235 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nup43P59235 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.31■□□□□ 0.2
Nup43P59235 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.31■□□□□ 0.2
Nup43P59235 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nup43P59235 Gm3375-201ENSMUST00000203929 796 ntBASIC16.31■□□□□ 0.2
Nup43P59235 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup43P59235 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nup43P59235 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup43P59235 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup43P59235 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup43P59235 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Nup43P59235 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup43P59235 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Nup43P59235 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Gm37055-201ENSMUST00000191866 133 ntBASIC16.3■□□□□ 0.2
Nup43P59235 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup43P59235 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Gm5417-201ENSMUST00000079706 384 ntBASIC16.3■□□□□ 0.2
Nup43P59235 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup43P59235 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup43P59235 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Nup43P59235 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nup43P59235 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup43P59235 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Nup43P59235 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Gm37025-201ENSMUST00000195159 829 ntBASIC16.29■□□□□ 0.2
Nup43P59235 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.29■□□□□ 0.2
Nup43P59235 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.29■□□□□ 0.2
Nup43P59235 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup43P59235 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.28■□□□□ 0.2
Nup43P59235 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.28■□□□□ 0.2
Nup43P59235 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Nup43P59235 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Nup43P59235 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.28■□□□□ 0.2
Nup43P59235 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nup43P59235 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Nup43P59235 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup43P59235 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
Nup43P59235 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.27■□□□□ 0.2
Nup43P59235 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup43P59235 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nup43P59235 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nup43P59235 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nup43P59235 Gm7638-201ENSMUST00000121348 967 ntBASIC16.27■□□□□ 0.2
Nup43P59235 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Nup43P59235 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nup43P59235 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.27■□□□□ 0.2
Nup43P59235 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms