Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rrp1P56183 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rrp1P56183 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rrp1P56183 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rrp1P56183 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rrp1P56183 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.48■□□□□ 0.71
Rrp1P56183 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.48■□□□□ 0.71
Rrp1P56183 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.48■□□□□ 0.71
Rrp1P56183 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp1P56183 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rrp1P56183 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rrp1P56183 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rrp1P56183 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.47■□□□□ 0.71
Rrp1P56183 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.47■□□□□ 0.71
Rrp1P56183 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp1P56183 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.46■□□□□ 0.71
Rrp1P56183 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.46■□□□□ 0.71
Rrp1P56183 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.46■□□□□ 0.71
Rrp1P56183 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rrp1P56183 Gm12933-201ENSMUST00000120203 872 ntBASIC19.46■□□□□ 0.71
Rrp1P56183 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rrp1P56183 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.46■□□□□ 0.71
Rrp1P56183 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp1P56183 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rrp1P56183 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.45■□□□□ 0.7
Rrp1P56183 Mir5133-201ENSMUST00000174955 77 ntBASIC19.45■□□□□ 0.7
Rrp1P56183 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rrp1P56183 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp1P56183 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.44■□□□□ 0.7
Rrp1P56183 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rrp1P56183 Gm10138-203ENSMUST00000206952 366 ntBASIC19.44■□□□□ 0.7
Rrp1P56183 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rrp1P56183 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rrp1P56183 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms