Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.91■■□□□ 1.1
Msh6P54276 Gm24589-201ENSMUST00000116692 94 ntBASIC21.91■■□□□ 1.1
Msh6P54276 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Msh6P54276 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Msh6P54276 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Msh6P54276 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC21.91■■□□□ 1.1
Msh6P54276 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh6P54276 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh6P54276 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh6P54276 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Msh6P54276 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Msh6P54276 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.9■■□□□ 1.1
Msh6P54276 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Msh6P54276 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh6P54276 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Msh6P54276 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Msh6P54276 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.89■■□□□ 1.1
Msh6P54276 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Msh6P54276 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Msh6P54276 Mir770-201ENSMUST00000103252 94 ntBASIC21.89■■□□□ 1.1
Msh6P54276 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Msh6P54276 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.89■■□□□ 1.1
Msh6P54276 Gm34391-201ENSMUST00000203706 907 ntBASIC21.89■■□□□ 1.1
Msh6P54276 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.89■■□□□ 1.1
Msh6P54276 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Msh6P54276 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Msh6P54276 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Msh6P54276 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Msh6P54276 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh6P54276 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh6P54276 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh6P54276 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.88■■□□□ 1.09
Msh6P54276 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Msh6P54276 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Msh6P54276 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Msh6P54276 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Msh6P54276 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh6P54276 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh6P54276 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.87■■□□□ 1.09
Msh6P54276 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.87■■□□□ 1.09
Msh6P54276 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.87■■□□□ 1.09
Msh6P54276 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Msh6P54276 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Msh6P54276 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.87■■□□□ 1.09
Msh6P54276 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.87■■□□□ 1.09
Msh6P54276 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Msh6P54276 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.87■■□□□ 1.09
Msh6P54276 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Gm6623-201ENSMUST00000173570 544 ntBASIC21.87■■□□□ 1.09
Msh6P54276 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Msh6P54276 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.86■■□□□ 1.09
Msh6P54276 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.86■■□□□ 1.09
Msh6P54276 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.86■■□□□ 1.09
Msh6P54276 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.86■■□□□ 1.09
Msh6P54276 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.86■■□□□ 1.09
Msh6P54276 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh6P54276 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Msh6P54276 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Msh6P54276 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Msh6P54276 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.85■■□□□ 1.09
Msh6P54276 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.85■■□□□ 1.09
Msh6P54276 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Msh6P54276 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Msh6P54276 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms