Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.25■□□□□ 0.83
LtbrP50284 Gm6623-201ENSMUST00000173570 544 ntBASIC20.25■□□□□ 0.83
LtbrP50284 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LtbrP50284 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LtbrP50284 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.25■□□□□ 0.83
LtbrP50284 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.25■□□□□ 0.83
LtbrP50284 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LtbrP50284 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LtbrP50284 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LtbrP50284 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Gm27459-201ENSMUST00000184860 107 ntBASIC20.24■□□□□ 0.83
LtbrP50284 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LtbrP50284 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Gm24841-201ENSMUST00000158676 357 ntBASIC20.23■□□□□ 0.83
LtbrP50284 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.23■□□□□ 0.83
LtbrP50284 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LtbrP50284 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.23■□□□□ 0.83
LtbrP50284 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtbrP50284 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LtbrP50284 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.22■□□□□ 0.83
LtbrP50284 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LtbrP50284 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LtbrP50284 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
LtbrP50284 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.22■□□□□ 0.83
LtbrP50284 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.22■□□□□ 0.83
LtbrP50284 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LtbrP50284 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.22■□□□□ 0.83
LtbrP50284 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtbrP50284 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LtbrP50284 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.21■□□□□ 0.83
LtbrP50284 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
LtbrP50284 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.21■□□□□ 0.83
LtbrP50284 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.21■□□□□ 0.83
LtbrP50284 Gm27525-201ENSMUST00000184465 107 ntBASIC20.21■□□□□ 0.83
LtbrP50284 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.21■□□□□ 0.83
LtbrP50284 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.21■□□□□ 0.83
LtbrP50284 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LtbrP50284 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LtbrP50284 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LtbrP50284 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LtbrP50284 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LtbrP50284 Olfr129-201ENSMUST00000122318 993 ntBASIC20.2■□□□□ 0.82
LtbrP50284 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.2■□□□□ 0.82
LtbrP50284 Gm26039-201ENSMUST00000158152 144 ntBASIC20.2■□□□□ 0.82
LtbrP50284 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtbrP50284 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LtbrP50284 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LtbrP50284 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LtbrP50284 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LtbrP50284 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LtbrP50284 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LtbrP50284 Mir770-201ENSMUST00000103252 94 ntBASIC20.19■□□□□ 0.82
LtbrP50284 Gm18733-201ENSMUST00000173950 856 ntBASIC20.19■□□□□ 0.82
LtbrP50284 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms