Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.14□□□□□ -0.15
Timp3P39876 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Timp3P39876 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Timp3P39876 Gm3375-201ENSMUST00000203929 796 ntBASIC14.14□□□□□ -0.15
Timp3P39876 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.14□□□□□ -0.15
Timp3P39876 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Timp3P39876 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Gm10418-201ENSMUST00000100943 576 ntBASIC14.13□□□□□ -0.15
Timp3P39876 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.13□□□□□ -0.15
Timp3P39876 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Timp3P39876 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.13□□□□□ -0.15
Timp3P39876 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.13□□□□□ -0.15
Timp3P39876 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timp3P39876 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Timp3P39876 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Timp3P39876 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.12□□□□□ -0.15
Timp3P39876 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.12□□□□□ -0.15
Timp3P39876 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Timp3P39876 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Timp3P39876 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timp3P39876 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.12□□□□□ -0.15
Timp3P39876 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.11□□□□□ -0.15
Timp3P39876 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Timp3P39876 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.11□□□□□ -0.15
Timp3P39876 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.11□□□□□ -0.15
Timp3P39876 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.11□□□□□ -0.15
Timp3P39876 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timp3P39876 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Timp3P39876 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Timp3P39876 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.1□□□□□ -0.15
Timp3P39876 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Timp3P39876 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Timp3P39876 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timp3P39876 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms