Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17■□□□□ 0.31
HmgclP38060 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17■□□□□ 0.31
HmgclP38060 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17■□□□□ 0.31
HmgclP38060 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17■□□□□ 0.31
HmgclP38060 Gm21814-202ENSMUST00000203277 873 ntBASIC17■□□□□ 0.31
HmgclP38060 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17■□□□□ 0.31
HmgclP38060 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HmgclP38060 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17■□□□□ 0.31
HmgclP38060 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
HmgclP38060 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HmgclP38060 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Mir5122-201ENSMUST00000175004 89 ntBASIC16.99■□□□□ 0.31
HmgclP38060 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
HmgclP38060 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HmgclP38060 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.98■□□□□ 0.31
HmgclP38060 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 Gm7638-201ENSMUST00000121348 967 ntBASIC16.98■□□□□ 0.31
HmgclP38060 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.98■□□□□ 0.31
HmgclP38060 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.98■□□□□ 0.31
HmgclP38060 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.98■□□□□ 0.31
HmgclP38060 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HmgclP38060 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
HmgclP38060 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.97■□□□□ 0.31
HmgclP38060 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.97■□□□□ 0.31
HmgclP38060 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HmgclP38060 Gm3375-201ENSMUST00000203929 796 ntBASIC16.97■□□□□ 0.31
HmgclP38060 Gm9731-201ENSMUST00000209480 747 ntBASIC16.97■□□□□ 0.31
HmgclP38060 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
HmgclP38060 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.97■□□□□ 0.31
HmgclP38060 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.97■□□□□ 0.31
HmgclP38060 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.97■□□□□ 0.31
HmgclP38060 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
HmgclP38060 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HmgclP38060 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HmgclP38060 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.96■□□□□ 0.31
HmgclP38060 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.96■□□□□ 0.31
HmgclP38060 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.96■□□□□ 0.31
HmgclP38060 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HmgclP38060 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HmgclP38060 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.96■□□□□ 0.3
HmgclP38060 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HmgclP38060 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HmgclP38060 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HmgclP38060 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
HmgclP38060 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms