Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a13P31649 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a13P31649 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
Slc6a13P31649 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a13P31649 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a13P31649 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a13P31649 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc6a13P31649 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc6a13P31649 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a13P31649 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Slc6a13P31649 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc6a13P31649 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc6a13P31649 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.5■□□□□ 0.39
Slc6a13P31649 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Gm37055-201ENSMUST00000191866 133 ntBASIC17.5■□□□□ 0.39
Slc6a13P31649 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Gm5417-201ENSMUST00000079706 384 ntBASIC17.5■□□□□ 0.39
Slc6a13P31649 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Slc6a13P31649 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Slc6a13P31649 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a13P31649 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.49■□□□□ 0.39
Slc6a13P31649 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Slc6a13P31649 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slc6a13P31649 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Slc6a13P31649 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Slc6a13P31649 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a13P31649 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Slc6a13P31649 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc6a13P31649 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc6a13P31649 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc6a13P31649 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Slc6a13P31649 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Slc6a13P31649 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Gm17661-201ENSMUST00000170317 270 ntBASIC17.48■□□□□ 0.39
Slc6a13P31649 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Gm37025-201ENSMUST00000195159 829 ntBASIC17.48■□□□□ 0.39
Slc6a13P31649 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a13P31649 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Slc6a13P31649 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.47■□□□□ 0.39
Slc6a13P31649 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a13P31649 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms