Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Vcam1P29533 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcam1P29533 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.89■□□□□ 0.77
Vcam1P29533 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vcam1P29533 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Vcam1P29533 Gm17807-201ENSMUST00000186869 298 ntBASIC19.89■□□□□ 0.77
Vcam1P29533 Gm17971-201ENSMUST00000190239 806 ntBASIC19.89■□□□□ 0.77
Vcam1P29533 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcam1P29533 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcam1P29533 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcam1P29533 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcam1P29533 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.88■□□□□ 0.77
Vcam1P29533 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vcam1P29533 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.88■□□□□ 0.77
Vcam1P29533 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.88■□□□□ 0.77
Vcam1P29533 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.88■□□□□ 0.77
Vcam1P29533 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcam1P29533 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcam1P29533 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcam1P29533 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.87■□□□□ 0.77
Vcam1P29533 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.87■□□□□ 0.77
Vcam1P29533 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcam1P29533 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.87■□□□□ 0.77
Vcam1P29533 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.87■□□□□ 0.77
Vcam1P29533 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vcam1P29533 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcam1P29533 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcam1P29533 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.87■□□□□ 0.77
Vcam1P29533 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.86■□□□□ 0.77
Vcam1P29533 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.86■□□□□ 0.77
Vcam1P29533 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Vcam1P29533 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcam1P29533 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.85■□□□□ 0.77
Vcam1P29533 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.85■□□□□ 0.77
Vcam1P29533 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Vcam1P29533 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Vcam1P29533 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Vcam1P29533 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcam1P29533 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vcam1P29533 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vcam1P29533 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vcam1P29533 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.84■□□□□ 0.77
Vcam1P29533 Gm27742-201ENSMUST00000184667 60 ntBASIC19.84■□□□□ 0.77
Vcam1P29533 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vcam1P29533 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.84■□□□□ 0.77
Vcam1P29533 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.84■□□□□ 0.77
Vcam1P29533 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vcam1P29533 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vcam1P29533 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Vcam1P29533 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Vcam1P29533 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcam1P29533 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcam1P29533 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcam1P29533 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcam1P29533 Gm13186-201ENSMUST00000118031 316 ntBASIC19.83■□□□□ 0.77
Vcam1P29533 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vcam1P29533 Gm27357-201ENSMUST00000183754 135 ntBASIC19.83■□□□□ 0.77
Vcam1P29533 Gm18669-201ENSMUST00000216049 778 ntBASIC19.83■□□□□ 0.77
Vcam1P29533 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcam1P29533 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Vcam1P29533 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Vcam1P29533 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vcam1P29533 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.82■□□□□ 0.76
Vcam1P29533 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms