Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Gm7638-201ENSMUST00000121348 967 ntBASIC15.62■□□□□ 0.09
Cd40P27512 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.62■□□□□ 0.09
Cd40P27512 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.62■□□□□ 0.09
Cd40P27512 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.62■□□□□ 0.09
Cd40P27512 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cd40P27512 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.62■□□□□ 0.09
Cd40P27512 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Cd40P27512 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.62■□□□□ 0.09
Cd40P27512 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cd40P27512 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cd40P27512 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.61■□□□□ 0.09
Cd40P27512 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cd40P27512 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.61■□□□□ 0.09
Cd40P27512 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.61■□□□□ 0.09
Cd40P27512 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cd40P27512 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd40P27512 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cd40P27512 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.6■□□□□ 0.09
Cd40P27512 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Cd40P27512 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.6■□□□□ 0.09
Cd40P27512 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.6■□□□□ 0.09
Cd40P27512 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cd40P27512 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cd40P27512 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Cd40P27512 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd40P27512 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.59■□□□□ 0.09
Cd40P27512 Il3ra-202ENSMUST00000223589 738 ntBASIC15.59■□□□□ 0.09
Cd40P27512 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cd40P27512 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Cd40P27512 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd40P27512 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Cd40P27512 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cd40P27512 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cd40P27512 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cd40P27512 Gm37055-201ENSMUST00000191866 133 ntBASIC15.58■□□□□ 0.08
Cd40P27512 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.58■□□□□ 0.08
Cd40P27512 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cd40P27512 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.58■□□□□ 0.08
Cd40P27512 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd40P27512 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms