Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf1bP25119 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf1bP25119 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16■□□□□ 0.15
Tnfrsf1bP25119 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Tnfrsf1bP25119 Gm20472-201ENSMUST00000174403 1240 ntBASIC16■□□□□ 0.15
Tnfrsf1bP25119 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tnfrsf1bP25119 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf1bP25119 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf1bP25119 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Tnfrsf1bP25119 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf1bP25119 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf1bP25119 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Gm30025-201ENSMUST00000218555 728 ntBASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.97■□□□□ 0.15
Tnfrsf1bP25119 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Gm37025-201ENSMUST00000195159 829 ntBASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.96■□□□□ 0.15
Tnfrsf1bP25119 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tnfrsf1bP25119 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tnfrsf1bP25119 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tnfrsf1bP25119 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Tnfrsf1bP25119 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Gm7638-201ENSMUST00000121348 967 ntBASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.95■□□□□ 0.14
Tnfrsf1bP25119 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms