Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.98■□□□□ 0.63
Msh3P13705 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh3P13705 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.98■□□□□ 0.63
Msh3P13705 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.98■□□□□ 0.63
Msh3P13705 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.98■□□□□ 0.63
Msh3P13705 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Msh3P13705 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh3P13705 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh3P13705 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh3P13705 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh3P13705 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh3P13705 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Msh3P13705 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.97■□□□□ 0.63
Msh3P13705 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.97■□□□□ 0.63
Msh3P13705 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.97■□□□□ 0.63
Msh3P13705 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.97■□□□□ 0.63
Msh3P13705 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Msh3P13705 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh3P13705 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Msh3P13705 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.96■□□□□ 0.63
Msh3P13705 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.96■□□□□ 0.63
Msh3P13705 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.96■□□□□ 0.63
Msh3P13705 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.96■□□□□ 0.63
Msh3P13705 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Msh3P13705 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Msh3P13705 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh3P13705 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Gm7791-201ENSMUST00000219066 539 ntBASIC18.95■□□□□ 0.62
Msh3P13705 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.95■□□□□ 0.62
Msh3P13705 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Msh3P13705 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.95■□□□□ 0.62
Msh3P13705 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh3P13705 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh3P13705 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh3P13705 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Msh3P13705 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh3P13705 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Msh3P13705 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh3P13705 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Msh3P13705 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.94■□□□□ 0.62
Msh3P13705 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh3P13705 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh3P13705 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh3P13705 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Msh3P13705 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.93■□□□□ 0.62
Msh3P13705 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Msh3P13705 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Msh3P13705 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Msh3P13705 Gm27000-201ENSMUST00000182943 842 ntBASIC18.93■□□□□ 0.62
Msh3P13705 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.93■□□□□ 0.62
Msh3P13705 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Msh3P13705 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Msh3P13705 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh3P13705 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh3P13705 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh3P13705 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh3P13705 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms