Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cxcl1P12850 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.31□□□□□ -0.12
Cxcl1P12850 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cxcl1P12850 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.31□□□□□ -0.12
Cxcl1P12850 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.31□□□□□ -0.12
Cxcl1P12850 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl1P12850 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cxcl1P12850 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.3□□□□□ -0.12
Cxcl1P12850 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl1P12850 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cxcl1P12850 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cxcl1P12850 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.29□□□□□ -0.12
Cxcl1P12850 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cxcl1P12850 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cxcl1P12850 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cxcl1P12850 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.29□□□□□ -0.12
Cxcl1P12850 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.29□□□□□ -0.12
Cxcl1P12850 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl1P12850 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.28□□□□□ -0.12
Cxcl1P12850 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.28□□□□□ -0.12
Cxcl1P12850 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cxcl1P12850 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cxcl1P12850 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl1P12850 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.27□□□□□ -0.12
Cxcl1P12850 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.27□□□□□ -0.12
Cxcl1P12850 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cxcl1P12850 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl1P12850 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms