Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Calm3P0DP28 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Calm3P0DP28 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Calm3P0DP28 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Calm3P0DP28 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Calm3P0DP28 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Calm3P0DP28 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Calm3P0DP28 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Calm3P0DP28 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Calm3P0DP28 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Calm3P0DP28 Gm7791-201ENSMUST00000219066 539 ntBASIC19.91■□□□□ 0.78
Calm3P0DP28 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Calm3P0DP28 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Calm3P0DP28 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Calm3P0DP28 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Calm3P0DP28 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Calm3P0DP28 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Calm3P0DP28 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Calm3P0DP28 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Calm3P0DP28 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.9■□□□□ 0.78
Calm3P0DP28 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Calm3P0DP28 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Calm3P0DP28 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Calm3P0DP28 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Calm3P0DP28 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Calm3P0DP28 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Calm3P0DP28 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Calm3P0DP28 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Calm3P0DP28 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Calm3P0DP28 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Calm3P0DP28 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Calm3P0DP28 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Calm3P0DP28 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Calm3P0DP28 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Calm3P0DP28 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.89■□□□□ 0.77
Calm3P0DP28 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.88■□□□□ 0.77
Calm3P0DP28 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Calm3P0DP28 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.88■□□□□ 0.77
Calm3P0DP28 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Calm3P0DP28 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Calm3P0DP28 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Calm3P0DP28 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Calm3P0DP28 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.87■□□□□ 0.77
Calm3P0DP28 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.87■□□□□ 0.77
Calm3P0DP28 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.87■□□□□ 0.77
Calm3P0DP28 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Calm3P0DP28 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Calm3P0DP28 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.86■□□□□ 0.77
Calm3P0DP28 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms