Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TnfP06804 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.33■□□□□ 0.52
TnfP06804 AA414768-201ENSMUST00000121924 1257 ntBASIC18.33■□□□□ 0.52
TnfP06804 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Mir1668-201ENSMUST00000184114 107 ntBASIC18.33■□□□□ 0.52
TnfP06804 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TnfP06804 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
TnfP06804 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.33■□□□□ 0.52
TnfP06804 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TnfP06804 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TnfP06804 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TnfP06804 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TnfP06804 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.32■□□□□ 0.52
TnfP06804 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.32■□□□□ 0.52
TnfP06804 Gm27389-201ENSMUST00000183622 195 ntBASIC18.32■□□□□ 0.52
TnfP06804 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.32■□□□□ 0.52
TnfP06804 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TnfP06804 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.32■□□□□ 0.52
TnfP06804 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TnfP06804 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TnfP06804 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TnfP06804 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TnfP06804 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.31■□□□□ 0.52
TnfP06804 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.31■□□□□ 0.52
TnfP06804 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.31■□□□□ 0.52
TnfP06804 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TnfP06804 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Gm21559-201ENSMUST00000220638 855 ntBASIC18.31■□□□□ 0.52
TnfP06804 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Gm8587-201ENSMUST00000076538 843 ntBASIC18.31■□□□□ 0.52
TnfP06804 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TnfP06804 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TnfP06804 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TnfP06804 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TnfP06804 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TnfP06804 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.3■□□□□ 0.52
TnfP06804 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.3■□□□□ 0.52
TnfP06804 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TnfP06804 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TnfP06804 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TnfP06804 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.3■□□□□ 0.52
TnfP06804 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TnfP06804 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TnfP06804 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.29■□□□□ 0.52
TnfP06804 Gm18958-201ENSMUST00000174258 762 ntBASIC18.29■□□□□ 0.52
TnfP06804 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TnfP06804 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TnfP06804 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TnfP06804 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.28■□□□□ 0.52
TnfP06804 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TnfP06804 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TnfP06804 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TnfP06804 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TnfP06804 Gm6345-202ENSMUST00000180900 204 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms