Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.6■□□□□ 0.25
Best1O88870 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.6■□□□□ 0.25
Best1O88870 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Best1O88870 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Best1O88870 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.6■□□□□ 0.25
Best1O88870 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Best1O88870 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Best1O88870 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.59■□□□□ 0.25
Best1O88870 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Best1O88870 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Gm26039-201ENSMUST00000158152 144 ntBASIC16.59■□□□□ 0.25
Best1O88870 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Gm27000-201ENSMUST00000182943 842 ntBASIC16.59■□□□□ 0.25
Best1O88870 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.59■□□□□ 0.25
Best1O88870 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Best1O88870 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Best1O88870 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Best1O88870 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Best1O88870 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Best1O88870 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.58■□□□□ 0.24
Best1O88870 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Best1O88870 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Best1O88870 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.58■□□□□ 0.24
Best1O88870 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.57■□□□□ 0.24
Best1O88870 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Best1O88870 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Best1O88870 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Best1O88870 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.57■□□□□ 0.24
Best1O88870 Gm9013-201ENSMUST00000132939 882 ntBASIC16.57■□□□□ 0.24
Best1O88870 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Best1O88870 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Best1O88870 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Best1O88870 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Best1O88870 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.57■□□□□ 0.24
Best1O88870 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Best1O88870 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.57■□□□□ 0.24
Best1O88870 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Best1O88870 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Best1O88870 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Best1O88870 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Best1O88870 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Best1O88870 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Best1O88870 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Gm11355-201ENSMUST00000121120 306 ntBASIC16.56■□□□□ 0.24
Best1O88870 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Best1O88870 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Best1O88870 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.56■□□□□ 0.24
Best1O88870 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Best1O88870 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.56■□□□□ 0.24
Best1O88870 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Best1O88870 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Best1O88870 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.55■□□□□ 0.24
Best1O88870 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.55■□□□□ 0.24
Best1O88870 Gm6345-202ENSMUST00000180900 204 ntBASIC16.55■□□□□ 0.24
Best1O88870 Gm5587-201ENSMUST00000206270 674 ntBASIC16.55■□□□□ 0.24
Best1O88870 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Best1O88870 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.55■□□□□ 0.24
Best1O88870 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Best1O88870 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms