Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.87□□□□□ -0.35
Rpl35aO55142 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpl35aO55142 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rpl35aO55142 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl35aO55142 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Gm13401-201ENSMUST00000117074 291 ntBASIC12.86□□□□□ -0.35
Rpl35aO55142 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.86□□□□□ -0.35
Rpl35aO55142 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpl35aO55142 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.86□□□□□ -0.35
Rpl35aO55142 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rpl35aO55142 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.86□□□□□ -0.35
Rpl35aO55142 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl35aO55142 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rpl35aO55142 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.85□□□□□ -0.35
Rpl35aO55142 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rpl35aO55142 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.85□□□□□ -0.35
Rpl35aO55142 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl35aO55142 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.84□□□□□ -0.35
Rpl35aO55142 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rpl35aO55142 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.84□□□□□ -0.35
Rpl35aO55142 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rpl35aO55142 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.84□□□□□ -0.35
Rpl35aO55142 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.84□□□□□ -0.35
Rpl35aO55142 Timm23-208ENSMUST00000226683 750 ntBASIC12.84□□□□□ -0.35
Rpl35aO55142 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Rpl35aO55142 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rpl35aO55142 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rpl35aO55142 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpl35aO55142 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.83□□□□□ -0.35
Rpl35aO55142 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpl35aO55142 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Rpl35aO55142 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpl35aO55142 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpl35aO55142 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpl35aO55142 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms