Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm42569-201ENSMUST00000200539 472 ntBASIC14.32□□□□□ -0.12
SncaO55042 Gm29791-202ENSMUST00000207888 369 ntBASIC14.32□□□□□ -0.12
SncaO55042 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.32□□□□□ -0.12
SncaO55042 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.32□□□□□ -0.12
SncaO55042 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SncaO55042 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.31□□□□□ -0.12
SncaO55042 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SncaO55042 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SncaO55042 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SncaO55042 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SncaO55042 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Flg-201ENSMUST00000050758 1488 ntBASIC14.31□□□□□ -0.12
SncaO55042 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SncaO55042 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.3□□□□□ -0.12
SncaO55042 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SncaO55042 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SncaO55042 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.29□□□□□ -0.12
SncaO55042 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SncaO55042 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.29□□□□□ -0.12
SncaO55042 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SncaO55042 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Gm18284-201ENSMUST00000172604 624 ntBASIC14.29□□□□□ -0.12
SncaO55042 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.29□□□□□ -0.12
SncaO55042 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SncaO55042 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.29□□□□□ -0.12
SncaO55042 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.29□□□□□ -0.12
SncaO55042 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.29□□□□□ -0.12
SncaO55042 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SncaO55042 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.28□□□□□ -0.12
SncaO55042 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.28□□□□□ -0.12
SncaO55042 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Gm44549-201ENSMUST00000208351 577 ntBASIC14.28□□□□□ -0.12
SncaO55042 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Zfp783-201ENSMUST00000095946 670 ntBASIC14.28□□□□□ -0.12
SncaO55042 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SncaO55042 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms