Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.84■□□□□ 0.29
Npc1O35604 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.84■□□□□ 0.29
Npc1O35604 Gm15565-201ENSMUST00000118890 427 ntBASIC16.84■□□□□ 0.29
Npc1O35604 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.84■□□□□ 0.29
Npc1O35604 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Npc1O35604 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Npc1O35604 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.84■□□□□ 0.29
Npc1O35604 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.84■□□□□ 0.29
Npc1O35604 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.84■□□□□ 0.29
Npc1O35604 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Npc1O35604 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.84■□□□□ 0.29
Npc1O35604 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Npc1O35604 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Npc1O35604 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Npc1O35604 Gm13401-201ENSMUST00000117074 291 ntBASIC16.83■□□□□ 0.28
Npc1O35604 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.83■□□□□ 0.28
Npc1O35604 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Gm27463-201ENSMUST00000183569 57 ntBASIC16.83■□□□□ 0.28
Npc1O35604 Gm38027-201ENSMUST00000192315 235 ntBASIC16.83■□□□□ 0.28
Npc1O35604 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Npc1O35604 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Npc1O35604 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.82■□□□□ 0.28
Npc1O35604 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Npc1O35604 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.82■□□□□ 0.28
Npc1O35604 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Npc1O35604 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.82■□□□□ 0.28
Npc1O35604 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.82■□□□□ 0.28
Npc1O35604 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Npc1O35604 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.82■□□□□ 0.28
Npc1O35604 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Npc1O35604 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Npc1O35604 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Npc1O35604 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.81■□□□□ 0.28
Npc1O35604 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Npc1O35604 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Npc1O35604 Gm6433-201ENSMUST00000118634 875 ntBASIC16.81■□□□□ 0.28
Npc1O35604 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.81■□□□□ 0.28
Npc1O35604 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Npc1O35604 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms