Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.51□□□□□ -0.25
Tnfsf11O35235 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf11O35235 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.5□□□□□ -0.25
Tnfsf11O35235 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf11O35235 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tnfsf11O35235 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.48□□□□□ -0.25
Tnfsf11O35235 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfsf11O35235 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfsf11O35235 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms