Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Alx4O35137 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Alx4O35137 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.39■□□□□ 0.05
Alx4O35137 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Alx4O35137 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.39■□□□□ 0.05
Alx4O35137 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Alx4O35137 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Alx4O35137 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alx4O35137 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Alx4O35137 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.38■□□□□ 0.05
Alx4O35137 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.38■□□□□ 0.05
Alx4O35137 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Alx4O35137 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx4O35137 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Alx4O35137 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.37■□□□□ 0.05
Alx4O35137 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Alx4O35137 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.37■□□□□ 0.05
Alx4O35137 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx4O35137 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Alx4O35137 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.36■□□□□ 0.05
Alx4O35137 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Alx4O35137 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.36■□□□□ 0.05
Alx4O35137 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.36■□□□□ 0.05
Alx4O35137 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Alx4O35137 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.36■□□□□ 0.05
Alx4O35137 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Alx4O35137 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.35■□□□□ 0.05
Alx4O35137 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.35■□□□□ 0.05
Alx4O35137 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Gm26524-201ENSMUST00000192339 390 ntBASIC15.35■□□□□ 0.05
Alx4O35137 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.35■□□□□ 0.05
Alx4O35137 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms