Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc2O08811 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc2O08811 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ercc2O08811 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc2O08811 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.66■□□□□ 0.42
Ercc2O08811 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ercc2O08811 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ercc2O08811 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.66■□□□□ 0.42
Ercc2O08811 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ercc2O08811 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ercc2O08811 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc2O08811 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ercc2O08811 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.66■□□□□ 0.42
Ercc2O08811 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.65■□□□□ 0.42
Ercc2O08811 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Ercc2O08811 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc2O08811 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc2O08811 Odf3b-204ENSMUST00000227834 930 ntBASIC17.65■□□□□ 0.42
Ercc2O08811 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ercc2O08811 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc2O08811 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc2O08811 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ercc2O08811 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ercc2O08811 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.64■□□□□ 0.41
Ercc2O08811 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.64■□□□□ 0.41
Ercc2O08811 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.64■□□□□ 0.41
Ercc2O08811 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.64■□□□□ 0.41
Ercc2O08811 Gm37025-201ENSMUST00000195159 829 ntBASIC17.64■□□□□ 0.41
Ercc2O08811 Gm21814-202ENSMUST00000203277 873 ntBASIC17.64■□□□□ 0.41
Ercc2O08811 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.64■□□□□ 0.41
Ercc2O08811 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.64■□□□□ 0.41
Ercc2O08811 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ercc2O08811 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.63■□□□□ 0.41
Ercc2O08811 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ercc2O08811 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.63■□□□□ 0.41
Ercc2O08811 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.63■□□□□ 0.41
Ercc2O08811 Gm3375-201ENSMUST00000203929 796 ntBASIC17.63■□□□□ 0.41
Ercc2O08811 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ercc2O08811 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.63■□□□□ 0.41
Ercc2O08811 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ercc2O08811 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc2O08811 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ercc2O08811 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc2O08811 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.62■□□□□ 0.41
Ercc2O08811 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc2O08811 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc2O08811 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc2O08811 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc2O08811 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ercc2O08811 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.62■□□□□ 0.41
Ercc2O08811 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Gm7638-201ENSMUST00000121348 967 ntBASIC17.61■□□□□ 0.41
Ercc2O08811 Gm17661-201ENSMUST00000170317 270 ntBASIC17.61■□□□□ 0.41
Ercc2O08811 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.61■□□□□ 0.41
Ercc2O08811 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms