Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ebf3O08791 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ebf3O08791 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.9■□□□□ 0.46
Ebf3O08791 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ebf3O08791 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ebf3O08791 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ebf3O08791 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ebf3O08791 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ebf3O08791 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.89■□□□□ 0.45
Ebf3O08791 Gm7638-201ENSMUST00000121348 967 ntBASIC17.89■□□□□ 0.45
Ebf3O08791 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Ebf3O08791 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ebf3O08791 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ebf3O08791 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf3O08791 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.88■□□□□ 0.45
Ebf3O08791 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.88■□□□□ 0.45
Ebf3O08791 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ebf3O08791 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ebf3O08791 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ebf3O08791 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.88■□□□□ 0.45
Ebf3O08791 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.88■□□□□ 0.45
Ebf3O08791 Gm24841-201ENSMUST00000158676 357 ntBASIC17.88■□□□□ 0.45
Ebf3O08791 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ebf3O08791 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.88■□□□□ 0.45
Ebf3O08791 Gm7791-201ENSMUST00000219066 539 ntBASIC17.88■□□□□ 0.45
Ebf3O08791 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf3O08791 Tgds-204ENSMUST00000228543 1594 ntBASIC17.87■□□□□ 0.45
Ebf3O08791 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ebf3O08791 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.87■□□□□ 0.45
Ebf3O08791 Gm16061-201ENSMUST00000122167 857 ntBASIC17.87■□□□□ 0.45
Ebf3O08791 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ebf3O08791 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ebf3O08791 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf3O08791 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
Ebf3O08791 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ebf3O08791 Gm10418-201ENSMUST00000100943 576 ntBASIC17.86■□□□□ 0.45
Ebf3O08791 Gm14859-201ENSMUST00000117752 357 ntBASIC17.86■□□□□ 0.45
Ebf3O08791 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.86■□□□□ 0.45
Ebf3O08791 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.86■□□□□ 0.45
Ebf3O08791 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf3O08791 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ebf3O08791 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Ebf3O08791 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms