Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tcof1O08784 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tcof1O08784 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.18■□□□□ 0.82
Tcof1O08784 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.18■□□□□ 0.82
Tcof1O08784 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Il3ra-202ENSMUST00000223589 738 ntBASIC20.18■□□□□ 0.82
Tcof1O08784 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcof1O08784 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.17■□□□□ 0.82
Tcof1O08784 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.17■□□□□ 0.82
Tcof1O08784 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tcof1O08784 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcof1O08784 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.16■□□□□ 0.82
Tcof1O08784 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Tcof1O08784 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.16■□□□□ 0.82
Tcof1O08784 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.16■□□□□ 0.82
Tcof1O08784 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Tcof1O08784 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.16■□□□□ 0.82
Tcof1O08784 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcof1O08784 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.15■□□□□ 0.82
Tcof1O08784 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.15■□□□□ 0.82
Tcof1O08784 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Tcof1O08784 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.15■□□□□ 0.82
Tcof1O08784 Gm18959-201ENSMUST00000208954 655 ntBASIC20.15■□□□□ 0.82
Tcof1O08784 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcof1O08784 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Tcof1O08784 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Tcof1O08784 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tcof1O08784 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Tcof1O08784 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.14■□□□□ 0.81
Tcof1O08784 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tcof1O08784 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.14■□□□□ 0.81
Tcof1O08784 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Tcof1O08784 Gm45058-201ENSMUST00000205810 766 ntBASIC20.14■□□□□ 0.81
Tcof1O08784 Gm7370-201ENSMUST00000219471 767 ntBASIC20.14■□□□□ 0.81
Tcof1O08784 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.14■□□□□ 0.81
Tcof1O08784 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Tcof1O08784 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.14■□□□□ 0.81
Tcof1O08784 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tcof1O08784 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tcof1O08784 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.13■□□□□ 0.81
Tcof1O08784 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tcof1O08784 Gm2274-201ENSMUST00000184539 609 ntBASIC20.13■□□□□ 0.81
Tcof1O08784 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.13■□□□□ 0.81
Tcof1O08784 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.13■□□□□ 0.81
Tcof1O08784 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tcof1O08784 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.13■□□□□ 0.81
Tcof1O08784 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tcof1O08784 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tcof1O08784 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.13■□□□□ 0.81
Tcof1O08784 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms