Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sec22bO08547 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.1■□□□□ 0.33
Sec22bO08547 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Gm11643-201ENSMUST00000119578 864 ntBASIC17.1■□□□□ 0.33
Sec22bO08547 Gm12441-201ENSMUST00000121806 588 ntBASIC17.1■□□□□ 0.33
Sec22bO08547 Gm13158-201ENSMUST00000122007 736 ntBASIC17.1■□□□□ 0.33
Sec22bO08547 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.1■□□□□ 0.33
Sec22bO08547 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sec22bO08547 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sec22bO08547 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.1■□□□□ 0.33
Sec22bO08547 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sec22bO08547 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sec22bO08547 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sec22bO08547 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sec22bO08547 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Gm27275-201ENSMUST00000184318 272 ntBASIC17.09■□□□□ 0.33
Sec22bO08547 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Gm20049-201ENSMUST00000219950 730 ntBASIC17.09■□□□□ 0.33
Sec22bO08547 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Sec22bO08547 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sec22bO08547 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sec22bO08547 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sec22bO08547 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sec22bO08547 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec22bO08547 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.08■□□□□ 0.33
Sec22bO08547 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sec22bO08547 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sec22bO08547 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.08■□□□□ 0.33
Sec22bO08547 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec22bO08547 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sec22bO08547 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Sec22bO08547 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sec22bO08547 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec22bO08547 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Sec22bO08547 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.07■□□□□ 0.32
Sec22bO08547 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec22bO08547 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.06■□□□□ 0.32
Sec22bO08547 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sec22bO08547 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Gm6576-201ENSMUST00000169678 883 ntBASIC17.06■□□□□ 0.32
Sec22bO08547 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.06■□□□□ 0.32
Sec22bO08547 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sec22bO08547 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec22bO08547 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sec22bO08547 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec22bO08547 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec22bO08547 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec22bO08547 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec22bO08547 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec22bO08547 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms