Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-1G3UXB3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-1G3UXB3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx1-1G3UXB3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Nkx1-1G3UXB3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx1-1G3UXB3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44357-201ENSMUST00000195897 142 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm19658-201ENSMUST00000196231 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44367-201ENSMUST00000196836 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44350-201ENSMUST00000197197 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44390-201ENSMUST00000197533 144 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44313-201ENSMUST00000198018 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44486-201ENSMUST00000198508 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44454-201ENSMUST00000198541 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44314-201ENSMUST00000199263 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44394-201ENSMUST00000199558 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44484-201ENSMUST00000199873 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44466-201ENSMUST00000200264 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm44359-201ENSMUST00000200671 138 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nkx1-1G3UXB3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.63■□□□□ 0.73
Nkx1-1G3UXB3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Gm9727-201ENSMUST00000161387 555 ntBASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Gm6089-201ENSMUST00000197666 938 ntBASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms