Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh11xF6ZNL5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh11xF6ZNL5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh11xF6ZNL5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh11xF6ZNL5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh11xF6ZNL5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh11xF6ZNL5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh11xF6ZNL5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdh11xF6ZNL5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh11xF6ZNL5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Gm17661-201ENSMUST00000170317 270 ntBASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh11xF6ZNL5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh11xF6ZNL5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Gm37055-201ENSMUST00000191866 133 ntBASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh11xF6ZNL5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.02■□□□□ 0.63
Pcdh11xF6ZNL5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh11xF6ZNL5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms