Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Gm14701-201ENSMUST00000117156 348 ntBASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc188F6WEU2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Gm27628-201ENSMUST00000184911 107 ntBASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc188F6WEU2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.46■□□□□ 0.38
Ccdc188F6WEU2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc188F6WEU2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc188F6WEU2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc188F6WEU2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Golph3-202ENSMUST00000226517 2359 ntBASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc188F6WEU2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Gm44872-201ENSMUST00000207864 420 ntBASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc188F6WEU2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms