Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.52■□□□□ 0.4
Ccdc149F6V035 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc149F6V035 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc149F6V035 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.52■□□□□ 0.4
Ccdc149F6V035 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc149F6V035 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc149F6V035 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc149F6V035 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gm5587-201ENSMUST00000206270 674 ntBASIC17.51■□□□□ 0.39
Ccdc149F6V035 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.51■□□□□ 0.39
Ccdc149F6V035 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc149F6V035 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.5■□□□□ 0.39
Ccdc149F6V035 Gm18958-201ENSMUST00000174258 762 ntBASIC17.5■□□□□ 0.39
Ccdc149F6V035 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc149F6V035 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc149F6V035 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Gm11355-201ENSMUST00000121120 306 ntBASIC17.48■□□□□ 0.39
Ccdc149F6V035 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc149F6V035 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc149F6V035 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc149F6V035 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc149F6V035 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc149F6V035 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Ccdc149F6V035 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc149F6V035 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc149F6V035 Gm26039-201ENSMUST00000158152 144 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms