Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb9E9Q5G2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb9E9Q5G2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Gm13474-201ENSMUST00000122466 815 ntBASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb9E9Q5G2 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Gm18032-201ENSMUST00000222541 538 ntBASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb9E9Q5G2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb9E9Q5G2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Pcdhb9E9Q5G2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb9E9Q5G2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb9E9Q5G2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Gm7977-201ENSMUST00000193787 748 ntBASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Pcdhb9E9Q5G2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms