Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm5878E9PUB3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm5878E9PUB3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm5878E9PUB3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm5878E9PUB3 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.98□□□□□ -0.33
Gm5878E9PUB3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Gm13216-201ENSMUST00000117145 591 ntBASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm5878E9PUB3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Gm10602-201ENSMUST00000098239 609 ntBASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm5878E9PUB3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm5878E9PUB3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm5878E9PUB3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm5878E9PUB3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm5878E9PUB3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Gm11434-201ENSMUST00000122379 629 ntBASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Gm4974-201ENSMUST00000209974 875 ntBASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Gm18025-201ENSMUST00000221733 862 ntBASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm5878E9PUB3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.94□□□□□ -0.34
Gm5878E9PUB3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms