Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Syce3B5KM66 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syce3B5KM66 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.81■□□□□ 0.76
Syce3B5KM66 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syce3B5KM66 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syce3B5KM66 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syce3B5KM66 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Syce3B5KM66 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Syce3B5KM66 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syce3B5KM66 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Syce3B5KM66 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Syce3B5KM66 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.79■□□□□ 0.76
Syce3B5KM66 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.79■□□□□ 0.76
Syce3B5KM66 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.79■□□□□ 0.76
Syce3B5KM66 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.79■□□□□ 0.76
Syce3B5KM66 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.79■□□□□ 0.76
Syce3B5KM66 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syce3B5KM66 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.78■□□□□ 0.76
Syce3B5KM66 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.78■□□□□ 0.76
Syce3B5KM66 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Syce3B5KM66 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Syce3B5KM66 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Syce3B5KM66 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Syce3B5KM66 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syce3B5KM66 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syce3B5KM66 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Syce3B5KM66 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syce3B5KM66 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.77■□□□□ 0.76
Syce3B5KM66 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.77■□□□□ 0.76
Syce3B5KM66 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syce3B5KM66 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syce3B5KM66 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Syce3B5KM66 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syce3B5KM66 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.77■□□□□ 0.75
Syce3B5KM66 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syce3B5KM66 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syce3B5KM66 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Syce3B5KM66 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.76■□□□□ 0.75
Syce3B5KM66 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.76■□□□□ 0.75
Syce3B5KM66 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.76■□□□□ 0.75
Syce3B5KM66 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Syce3B5KM66 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.76■□□□□ 0.75
Syce3B5KM66 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.76■□□□□ 0.75
Syce3B5KM66 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Syce3B5KM66 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syce3B5KM66 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syce3B5KM66 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms