Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.19■□□□□ 0.82
Usp42B2RQC2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Gm27463-201ENSMUST00000183569 57 ntBASIC20.18■□□□□ 0.82
Usp42B2RQC2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp42B2RQC2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.17■□□□□ 0.82
Usp42B2RQC2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.17■□□□□ 0.82
Usp42B2RQC2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp42B2RQC2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.16■□□□□ 0.82
Usp42B2RQC2 Gm11539-201ENSMUST00000119837 557 ntBASIC20.16■□□□□ 0.82
Usp42B2RQC2 Gm13436-201ENSMUST00000120418 567 ntBASIC20.16■□□□□ 0.82
Usp42B2RQC2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Mir6982-201ENSMUST00000184354 68 ntBASIC20.16■□□□□ 0.82
Usp42B2RQC2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.16■□□□□ 0.82
Usp42B2RQC2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp42B2RQC2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.15■□□□□ 0.82
Usp42B2RQC2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp42B2RQC2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Usp42B2RQC2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Usp42B2RQC2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp42B2RQC2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp42B2RQC2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Gm15565-201ENSMUST00000118890 427 ntBASIC20.14■□□□□ 0.81
Usp42B2RQC2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp42B2RQC2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp42B2RQC2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp42B2RQC2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp42B2RQC2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp42B2RQC2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms