Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gm12887B1AVM1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Gm9988-201ENSMUST00000069786 435 ntBASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm12887B1AVM1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Reep4-203ENSMUST00000226563 1444 ntBASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm12887B1AVM1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Gm21956-201ENSMUST00000179946 522 ntBASIC14□□□□□ -0.17
Gm12887B1AVM1 Mir8112-201ENSMUST00000184382 131 ntBASIC14□□□□□ -0.17
Gm12887B1AVM1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14□□□□□ -0.17
Gm12887B1AVM1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm12887B1AVM1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm12887B1AVM1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms