Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Gm18733-201ENSMUST00000173950 856 ntBASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Gm27525-201ENSMUST00000184465 107 ntBASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44357-201ENSMUST00000195897 142 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm19658-201ENSMUST00000196231 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44367-201ENSMUST00000196836 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44350-201ENSMUST00000197197 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44390-201ENSMUST00000197533 144 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44313-201ENSMUST00000198018 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44486-201ENSMUST00000198508 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44454-201ENSMUST00000198541 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44314-201ENSMUST00000199263 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44394-201ENSMUST00000199558 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44484-201ENSMUST00000199873 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44466-201ENSMUST00000200264 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm44359-201ENSMUST00000200671 138 ntBASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a6B1AVK5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a6B1AVK5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a6B1AVK5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a6B1AVK5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Gm11452-201ENSMUST00000122376 690 ntBASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col4a6B1AVK5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms